BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037B05LP1|AL430343
(889 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1672 1690 0.0
>3x_Contig1672
Length = 13609
Score = 1690 bits (850), Expect = 0.0
Identities = 880/889 (98%), Gaps = 3/889 (0%)
Strand = Plus / Plus
Query: 1 gatggaatkcacgccaatgtacttcttgatcatcagcgatcatattcttctcttgaatgc 60
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 280 gatggaatgcacgccaatgt-cttcttgatcatcagcgatcatattcttctcttgaa-gc 337
Query: 61 tcacgctcagtaaatgtgtgataataatcgatttggtcagtttcaccaactgtaggcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tcacgctcagtaaatgtgtgataataatcgatttggtcagtttcaccaactgtaggcttg 397
Query: 121 aaaatagtgttaatgatatagtaaagggcgaaggtaacggcgaatttkaaaatgaacgaa 180
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 398 aaaatagtgttaatgatatagtaaagggcgaaggtaacggcgaattggaaaatgaacgaa 457
Query: 181 ccttggaagaagtgttcaatacctgtattgataggaatgtttgggttagccgcattgatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ccttggaagaagtgttcaatacctgtattgataggaatgtttgggttagccgcattgatc 517
Query: 241 aaaccaggcaaacccggggccgcaccacataagaaacaaaggatgttcttccagttaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 aaaccaggcaaacccggggccgcaccacataagaaacaaaggatgttcttccagttaata 577
Query: 301 ccgtwctgaaaccagtnaattgaggaaggagaatcatcgtaacagtcggataacttgata 360
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ccgtactgaaaccagtaaattgaggaaggagaatcatcgtaacagtcggataacttgata 637
Query: 361 acgccctttctaatgacaaaatagtcacaaacaaacattgcagttatatggtgtgatgaa 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 638 acgccctttctaatgacaaaatagtcacaaacaaacattgcagtta-atggtgtgatgaa 696
Query: 421 aacagtgaacgaagacataactgtgaggaaagtggaagtagcattatagaataaccatgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 aacagtgaacgaagacataactgtgaggaaagtggaagtagcattatagaataaccatgg 756
Query: 481 ttgagtaggccaagccaacaacatgatcaatattgaacctcttctgatgttaatgtaacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 ttgagtaggccaagccaacaacatgatcaatattgaacctcttctgatgttaatgtaacg 816
Query: 541 tgggaagatagaagccaaatccatgccaccagagattgcattactgatacagttgacacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 tgggaagatagaagccaaatccatgccaccagagattgcattactgatacagttgacacc 876
Query: 601 aagctgagaaattagtaaaccgagacctgcaaagaaggcagcagctctggacttcggagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 877 aagctgagaaattagtaaaccgagacctgcaaagaaggcagcagctctggacttcggagt 936
Query: 661 ataatttagctgcatccaatacatgcagatatcattaggcatccaaaaagactcgccgta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937 ataatttagctgcatccaatacatgcagatatcattaggcatccaaaaagactcgccgta 996
Query: 721 tttttctaataaagcagaagcagtracaatacccatcaaaggaagcacgatacccattac 780
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 997 tttttctaataaagcagaagcagtaacaatacccatcaaaggaagcacgatacccattac 1056
Query: 781 gttgacaccgattaggataccgatgtaagcagatctgggccttttgttgaaacgagagaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1057 gttgacaccgattaggataccgatgtaagcagatctgggccttttgttgaaacgagagaa 1116
Query: 841 atcggattggtttgaaataccagcgataatgaatgaataccaagcattc 889
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1117 atcggattggtttgaaataccagcgataatgaatgaataccaagcattc 1165
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6022
Number of Sequences: 1807
Number of extensions: 6022
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 889
length of database: 10,358,551
effective HSP length: 16
effective length of query: 873
effective length of database: 10,329,639
effective search space: 9017774847
effective search space used: 9017774847
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)